0.4.9 (2016-08-01)¶
Changes since 0.4.8 (2016-07-19).
Special Attention¶
A small number of alignments provided by NCBI do not begin at the transcript start. These exist in UTA as-is and lead to incorrect mapping and validation. Issue #346 contains the list of 52 transcripts in 37 genes which exhibit this issue; please review prior results. hgvs will now refuse to use such alignments.
Bug Fixes¶
- #346 (partial fix): ensure that alignment starts at transcript position 0 [BROKEN: ab402bf020c6]
- fixes #338: check position range limit when normalizing [BROKEN: da5f1fbcf76d]
- fixes #285, #334, #335, #324, #340: inversions parsing, formatting, and normalization [BROKEN: 29a7b8634b01]
- fixes #340: do not accept sequence following inv [BROKEN: f76e1cb83422]